Saturday, November 21, 2020

We have no idea how life on Earth began

My late Aunt, Dr Jean Youatt (1925-2017), was a very well-respected microbiologist in Australia; recognised by the Australian Acadamy of Science in 2000 for her ground-breaking achievements as a female scientist. Don't ask me why now but, it has occurred that this would be a good place to post the eponymous item that she wrote many years ago but only sent me in the year before she died. I believe it speaks for itself: This outline needs knowledge of Chemistry and Biochemistry to follow the arguments. A non-scientist will need to refer to literature or consult knowledgeable people. Evolutionary biologists avoided this difficult subject even after structures of proteins and nucleic acids became well known. But it has been admitted by Professors Davis, Reese and Dawkins recently on TV that we have no idea how life on earth began. The simplest form of life that can reproduce itself is a bacterium and for one of them to form there would have to be together in one place the many components required for one bacterium. There has to be a wall which separates the organism from its environment and all the walls we know are complex structures with polymers involving proteins, lipids and polysaccharides. Inside the cell there have to be proteins and nucleic acids. The nucleic acids consist of long chains of sugars ribose in RNA and D ribose in DNA linked by phosphate ester bonds and for each sugar molecule a purine or pyrimidine base is attached to the sugar and it takes three of these bases to code for each amino acid in a protein. We consider the structure of RNA. Ribose is a sugar with 5 carbon atoms. If it is drawn as an open chain it has 3 chiral atoms (related as mirror images) and thus 23 different structures possible = 8. In the nucleic acid structure the sugar is in a ring form and two rings are possible and known. Forming a ring makes a new chiral centre raising our possibilities to 16 but the ring can be made of 5 or 6 atoms so now 32 possibilities and then with RNA there are 2 ways the phosphate ester linkage can form so 64 possibilities. In the living cell the ribose rings are all identical and there are millions of them needed in just one cell. The deoxyribose of DNA forms a 5 membered ring too but has one less chiral atom and one way to form the phosphate link so 16 ways to form and this too requires millions of identical forms in the DNA. In the code for making proteins there are just 5 bases used and they must be in a specific order to define a proteins structure. The atoms which form the bases could come together in many other forms further increasing the huge number of atoms which have to form in such a specific way. "Similarly when we come to consider proteins there are 16 common amino acids but many other possibilities and proteins which can have 200 amino acids have to have them in the right order to perform their function. There may be 2000 proteins required. Amino acids formed by chemical reaction which are always a mixture of 2 chiral forms, that is molecules related to each other as mirror images which cannot be superimposed. Proteins use only one of these two forms commonly referred to as the L form. The D and L forms have all the same chemical and physical properties and so cannot be separated by any common methods. They can be separated by using reaction with other chiral atoms which form by enzyme reactions in living cells and in no other way. Sometimes partial separations have been claimed but not when everything used has been rigorously freed of all organic compounds and the medium kept sterile throughout the experiment. Now we have to assume that all the essential structures are in one place at one time because if they form by chemical reactions the processes are reversible. This may suffice to show that for a viable organism to come together there is an astronomical number of alternative structures from which just one must come. It is worth mentioning that for 60 years or more scientists have made mixtures of L amino acids, D sugars, vitamins, purine and pyrimidine bases etc required to grow human cells and cells have been grown without any reports of new life forms emerging. Thus for the scientist asking “Did life emerge by chance or was there a creator?” the only position possible is “I don’t know” and individuals can choose a creator or chance theory to their taste.